Core functions: ggml_ot#
The core functions of the ggml-ot package to train, tune and test on AnnData or array-like data.
Training & hyperparameter tuning#
Perform supervised optimal transport by ground metric learning. |
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Train GGML with exact OT (EMD2). |
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Train GGML with Sinkhorn-regularized OT. |
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Tune hyperparameters by performing a Grid Search and Cross-Validation. |
Cross-validation#
Tests ground metric on a given dataset. |
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Trains and cross-validates ground metrics on train-test splits. |
Setup dataset#
Dataset to train GGML based on AnnData. |
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Dataset to train GGML based on array data. |